YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109459737
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIFVGNVDG ADTTPEELAA LFAPYGTVMS CAVMKQFAFV HMRENAGAVR AIEALHGHEL  60
   61 RPGRALVVEM SRPRPLNTWK IFVGNVSAAC TSQELRSLFE RRGRVIECDV VKGCVEMVKL 120
  121 FIGNLPREAT EQEIRSLFEQ YGKVLECDII KNYGFVHIED KTAAEDAIRN LHHYKLHGVN 180
  181 INVEASKNKS KASTKLHVGN ISPTCTNQEL RAKFEEYGPV IECDIVKDYA FVHMERAEDA 240
  241 VEAIRGLDNT EFQGKRMHVQ LSTSRLRTAP GMGDQSGCYR CGKEGHWSKE CPIDRSGRVA 300
  301 DLTEQYNEQY GAVRTPYTMS YGDSLYYNNT YGALDAYYKR CRAARSYEAV AAAAASAYNN 360
  361 YAEQTLSQLP QVQNTAMASH LTSTSLDPYN RHLLPPSGAA AAAAAAAAAA AACTAASTPY 420
  421 YGRDRSPLRR ATGPVPTVGE GYGYGHDSEL SQASAAARNS LYDMARYERE QYADRARYSA 480
  481 F

Type	Start	End	Confidence
Non-Cytoplasmic	1	398	0.96
Transmembrane Helix	399	421	0.77
Cytoplasmic	422	481	0.80