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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109459483
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSELPTQYTT STIHTGPTHE KPHFFPGTDS VLAVRLVNGG DRCRGRVEIL YQGSWGTVCD  60
   61 DSWDINDANV VCRQLGCGGA LSAPGSAQFG QGSGSIVLDE VACTGNETYL WNCSHRGWLS 120
  121 HNCDHQEDAG VICSECEQLL SAFARDPLSS LEEGSSSFCP SGLSQRQRAV HSPLLLADVG 180
  181 TDSVLAVRLV DGGDSCRGRV EILYQGSWGT VCDDSWDIHD ANVVCRQLGC GGALSAPGSA 240
  241 QFGQGSGSIV LDDVACTGHE VYLWNCSHRG WLSHNCGHQE DAGVICSWPK YAGSSVHMHK 300
  301 AVSGSTHCSL SSQICTCANS LSGGRTQRNV LQLTGQRKLS PSANPVQAFV LFNHVGFLSL 360
  361 DLNEVDISSL GDQLTKFGDI QCGTDSVLAV RLVDGGDSCR GRVEILYQGS WGTVCDDSWD 420
  421 INDANVVCRQ LGCGGALSAP GSDQFGQGSG SIVLDEVSCT GHEAYLWNCS HQGWLSHNCG 480
  481 HQEDAGVVCS DVVYVTEETT EGWWNPGGTP NGTDSVLAVR LVNGGDRCRG RVEIFYQGSW 540
  541 GTVCDDSWDI NDANVVCRQL GCGGALSAPG SDQFGQGSGS IVLDEVACTG NETYLWNCSH 600
  601 RGWLSHNCDH QEDAGVICSG TDSVLAVRLV NGGNSCRGRV EILYQGSWGT VCDDSWDIND 660
  661 ANVVCRQLGC GGALSAPGSD QFGQGSGSIV LDEVACTGNE TYLWNCSHRG WLSHNCDHQE 720
  721 DAGVICSGTD SGLAVRLVNG GDTCRGRVEI LYQGSWGTVC DDSWDINDAN VVCRQLGCGG 780
  781 ALSAPGSDQF GQGSGSIVLD EVSCTGHEAY LWNCTHRGWL SHNCGHQEDA GVICSDVYAT 840
  841 PSFSNKQSHT GKLSPSANPV QAFVLFNHVG FLSLDLNEVD ISSLGDQLTK FGDLQCGTDS 900
  901 VLAVRLVNGG DRCRGRVEIL YQGSWGTVCD DSWDINDAKV VCRQLGCGGA LSAPGSDQFG 960
  961 QGSGSIVLDE VACTGHEAYL WNCTHRGWLS HNCGHHEDAG VICSASQTSS PTPGLWNPRG1020
 1021 THNDVVYVTE ETTEVKFSSS PFSDSFNGGP VLSSVVXXWH LPMNLLYSGY VSQERSTSGT1080
 1081 DSGLAVRLVN GGDRCQGRVE ILYQGSWGTV CDDSWDINDA NVVCRQLGCG RALSAPENAK1140
 1141 FGQGSGSIVL DDMACSGNEA YLWSCSHQGW LSHNCGHQED AGVVCSASQS RSPTPGWWNP1200
 1201 AGTSRDVSYR TEQTTDASQT SSPTPPSQTS SPTPGWWNPG GTNNDVSYGP EQTTDRTDSG1260
 1261 LAVRLVNGGD SCRGRVEILY QGSWGTMCDD SXDTKDADVV CRQLGCGGTL SAPGSAQFGQ1320
 1321 GSESIVLDDV ACTGHEAYLW SCSHRGWLSH NCGHHEDAGV ICSDAQTQST TWPDMWPTTT1380
 1381 PETTTGNVSS YHGLTPCTSQ VFNLSPWWTL PIPFNXSGGC ISLPVLCYSL SRYPGKHPPP1440
 1441 PTPSLWKVFV SFLIFFDDFX LEIDFIXYXN GYSSLLLLTI CLENCFPAFH SEVMSVFVSE1500
 1501 VSFSAPGFQM AFGNIDCTNP PSNPALFPSP DWWTTKYSSS EYICGGLLTL PSGQFSSPYY1560
 1561 PGSYPNNARC LWKIFVSSMN RVTVVFTDVQ LEGGCNFDYI LVFDGPEYNS SLIARVCDGS1620
 1621 NGSFTSTQNF MSVVFITNGS VTRRGFQADY YSTPISTSTR NDSSLVLRLV NGTNRCEGRV1680
 1681 EILYRGSWGT VCDNSWDIND ANVVCRQLGC GSALSAPGNA WFGQGSGLIV LDDVSCSGYE1740
 1741 SHLWNCRHPG WLVHNCRHVE DAGVICSLPD PTPSPGPVNY TCGGFLTGFS GQFSSPFYPG1800
 1801 SYPNNARCLW NIEVPNNYRV TVVIRDVQLE GGCNYDYIEI FDGPHHSSPL IARVCDEAMG1860
 1861 SFTSTSNFMS VRFITNHSVT RRGFRADYYS DFDNNTTNLL CLSNHMRASV SRSYLQSMGY1920
 1921 SARDLVIPDW NVSYQCQPQI TQREVIFTIP YTGCGTTKQA DNETINYSNF LKAAVSNGII1980
 1981 ERRKDLHIHV SCKMLQNTWV NTMYITNNTV EIQEVQYGNF DVNISFYTSS SFLYPVTSSP2040
 2041 YYVDLDQNLY LQAEVLHSDT SLALFVDTCV ASPHPNGFSS LTYDLIRSGC IRDETYQSYS2100
 2101 SPSPRITRFK FSSFHFLNRF PSVYLQCKLV VCRAYDVSSR CYRGCVVRSK RDVGSYQEKV2160
 2161 DVVLGPIQLQ SPSKEKRSLD LAVADVEKPA NSQEVYPTAA IFGGVFLALV VAVAAFTLGR2220
 2221 KTRTARGQPP STKM

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