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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109459345
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEERCLVSGA ARLQAGERRA TGRQGGSAGA EAAGAGQSPG QPSGCHTSGV CLGAETQEAL  60
   61 GARSAAEARA RWTASRLHGF IENEDQPCGR PTRNLSNCRP GREGIPLRAT VPALQQKTEA 120
  121 KHTQAPRQKV LVTGGGGYLG FSLGSSLAKK GASVILLDLR RPQWPLPSGT EFIQADVRDE 180
  181 EALYQAFQGV DCVFHVASYG MSGAEKLQKR EIESINVGGT KLVINVCVRR RVPRLVYTST 240
  241 VNVTFGGKPI EQGNEDSIPY FPLDKHMDHY SRTKAIADQL ILMANGTPLL GGGTLRTCVL 300
  301 RPPGIYGPEE QKHLPRVASH IKKRLFMFRF GDRRTHMNWV HVQNLVQAHM RAAEGLTLAK 360
  361 GYVASGQAYY IHDGESVNLF EWMAPLFEKL GYSQPWIQVP TSCVYLTAAV MEFLHLALRP 420
  421 ICTISPLLTR SEVLSMTVTH TFQIAKARAQ LGYAPDKFSF ADAVERYVQA TTPQPCCCTV 480
  481 LTLLRLLLLL LLLLGLLGLA LYFLGLQPLQ AVVERL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle