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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109458888
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCSCRGGAGH REGGRSASGA EPARGREPQE LLLPRAGVAG RARRAWSPLK GAGRGCAGGR  60
   61 AEQSAGAGPR PGGRRGAGMA ARGRRAWLSM LLGLVLGFVL ASRLVLPRAS ELKRVGPRRR 120
  121 PNPEGCRPGQ AASQPGGAPG DARGAQLWPQ GSAAEGVPRD RNFLFVGVMT AQKYLQTRAV 180
  181 AAYRTWSKTI PGKVEFFSSE GSDTSIPIPV VPLRGVDDSY PPQKKSFMML KYMHDHYLDK 240
  241 YEWFMRADDD VYIKGDRLES FLRSLNSSEP LFLGQTGLGT TEEMGKLALE PGENFCMGGP 300
  301 GVILSREVLR RMAPHIGKCL REMYTTHEDV EVGRCVRRFA GVQCVWSYEM QQLFYENYEQ 360
  361 NKKGYIRDLH SSKIHRAITL HPNKNPPYQY RLHSYMLSRK IAELRHRTIQ LHREIVLMSK 420
  421 YSSTEIQKED LQLGIPPSFM RFQARQREEI LEWEFLTGKY LYSATEGQPP RRGMDSAQRE 480
  481 ALDDIVLQVM EMINANAKTR GRIIDFKEIQ YGYRRVNPMY GAEYILDLLL LYKKHKGKKM 540
  541 TVPVRRHAYL QQTFSKIQFV EHEGLDAQEL ADRINQDSGS LSFLSNSLKK LVPFQLPGSK 600
  601 MEHKEPKEKK INILIPLSGR FDMFVRFMGN FEKTCLIPNL NVKLVILLFN SDSNPDKAKQ 660
  661 VELMRDYRVK YPKADMQVLP VSGGFSRALA LEVGSSQFSN ESLLFFCDVD LVFTAEFLQR 720
  721 CRANTVLGQQ IYFPIIFSQY DPKIVYSGKV PSDNHFAFTQ KTGFWRNYGF GITCIYKGDL 780
  781 VRVGGFDVSI QGWGLEDVDL FNKVVQAGLK TFRSQEVGVV HVHHPVFCDP NLDPKQYKMC 840
  841 LGSKASTFGS TQQLAEMWLE KNDPSYSRGG NGSARTV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle