YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109458687
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIWLCVLGV ADGARMASGR PEELWEAVVG AAERFRARTG TELVLLTAAP PPPPRPGPCA  60
   61 YAAHGRGALA EAARRCLHDI AQAHRAATAT RPPGPPPAPQ PPSPAPSSPP RPALAREEDE 120
  121 EDEDEPTETE TSGERLGGSD NGGLFMMDED ATLQDLPPFC ESDPESTDDG SLSEETPAGP 180
  181 PAYPKLPATA LPTQQYAKSL PVSVPVWAFK EKRTEARSSD EENGPPSSPD LDRIAASMRA 240
  241 LVLREAEDNQ VFGDLPRPRL NTSDFQKLKR KY

Type	Start	End	Confidence
Signal Peptide	1	17	0.79
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	272	0.99