YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109458445
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASAALFSR LRSGLRVGAR GLCTRLAPPP PRTPEQVTEI ANRGGSKTQG PQHQPGSEGP  60
   61 SYAKKVALWI AGLLGAGGTV SIVYIFGKRH NPQLLAPDIY CETPFSFFML SSFPDSSLNK 120
  121 AIN

Type	Start	End	Confidence
Cytoplasmic	1	65	0.76
Transmembrane Helix	66	87	0.91
Non-Cytoplasmic	88	123	0.70