YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|94574086, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIMAARIGQR ALKKVVSGCC PKSAAAARAP APAQVPARNV SYLASCGILM SRTLPLHTSV  60
   61 FPKKIHARTF FRIAAPLINK RKEYSERRII GYSMQEMYDV VSGMEDYKHF VPWCKKSDII 120
  121 SRRSGYCKTR LEIGFPPVLE RYTSVVTLVK PHLVKASCTD GKLFNHLETV WRFSPGLPGY 180
  181 PRTCTLDFSI SFEFRSLLHS QLATLFFDEV VKQMVTAFER RACKLYGPET NIPRELMLHE 240
  241 VHHT

Type	Start	End	Confidence
Signal Peptide	1	26	0.69
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	244	0.99