YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	KMO_DANRE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.41
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METAFSHPPQ SSSSKRKVIA VVGGGLVGSL NACFLAKRGF DVEVYESRED IRQAKVVKGR  60
   61 SINLALSHRG RQALKHVGME DKIISKGIPM HARMIHNVNG KRSPIPYGKK GQYILSVDRA 120
  121 NLNKELLTAA EAYPNTRLNF NHKLHDWSPK TGTMTFIGSD GQKTETQADL IVGCDGAFSA 180
  181 VRKQFLRQSR FNYSQTYIPH GYMELTMPPK DGDFAMEPNY LHIWPRNTFM MIALPNLDRT 240
  241 FTCTLFMPFE DFEKIRTGDE LLRFFHKYFP DSVPLIGVEA LKQDFFRLPA QAMVSVKCCP 300
  301 YHLFEKCVLM GDAAHAVVPF YGQGMNAGFE DCLVFDEIMD QFNENLVAVL QEYTRVRVPD 360
  361 DHAIADLAMY NYIEMRAHVN SKYFIFRKYL DNLLHFFMPK TIVPLYTMVT FTRTRYNDAV 420
  421 NRWHWQNKVI TRGLWLCGFV SAAGGTYVLV KNSHKLPSIS AEQLWTRILA LKLF

Type	Start	End	Confidence
Signal Peptide	1	32	0.70
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	474	0.91