YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109132796
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDYADLSNT ELTALLRRYN IPHGPVVGST RRLYEQKIFE YETQRRRLSP PGSSAASSYR  60
   61 FSDLNSTSGD SDMYDLPKKE DALLYQSKGY NDDYYEESYF TTRTYGEPES AGLSRGFRQS 120
  121 VTSLPDADTF HHQVRDDDLL SSSEEECKDR ERPMYGRDSA YQSIAHYRPV SASRSSLDLS 180
  181 YYPTSSSTSS MSSSSSSSSW LTRRAIRPEN HAPGAGLGQD HQVPLWGQLL LFLVFVIVLF 240
  241 FIYYFMQAEE GNPFQREP

Type	Start	End	Confidence
Cytoplasmic	1	224	0.55
Transmembrane Helix	225	246	0.93
Non-Cytoplasmic	247	258	0.55