YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109132475
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRVNMIMAE SPGLITICLL GYLLSAECTV FLDHENANKI LNRPKRYNSG KLEEFVQGNL  60
   61 ERECMEEKCN FEEAREVFEN TEKTTEFWKQ YVDVTCNIKN GRCKQFCKNT ADNKVVCSCT 120
  121 EGYRLAENQK SCEPAVPFPC GRVSVSQTST LTRAETVFPD VEYVNSTEAE TILDNITQST 180
  181 QSFNDFTRVV GGEDAKPGQF PWQVVLNGKV DAFCGGSIIN EKWVVTAAHC VETDAKITVV 240
  241 AGEHNIEETE HTEQKRNVIR IIPHHNYNAT INKYNHDIAL LELDEPLVLN SYVTPICIAD 300
  301 KEYTNIFLKF GSGYVSGWGR VFNKGRSASV LQYLRVPLVD RATCLRSTKF TIYNNMFCAG 360
  361 FHEGGRDSCQ GDSGGPHVTE VEGTSFLTGI ISWGEECAMK GKYGIYTKVS RYVNWIKEKT 420
  421 KLT

Type	Start	End	Confidence
Signal Peptide	1	28	0.72
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	423	0.99