YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109132169
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAVAAAGA GEPQSPDELL PKGDAEKPEE ELEEDDDEEL DETLSERLWG LTEMFPERVR  60
   61 SAAGATFDLS LFVAQKMYRF SSAALWIGTT SFMILVLSVV FETEKLQMEQ QQQLQQRQIL 120
  121 LGPNTGLSGG MPGPLPSLPG KI

Type	Start	End	Confidence
Cytoplasmic	1	81	0.85
Transmembrane Helix	82	101	0.91
Non-Cytoplasmic	102	142	0.82