YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109130740
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEQRAALPP APKEYAHPNI TNTLVQAESL DAGVRLRWGR GLTARPDASA MEEYAREPCP  60
   61 WRIVDDCGGA FTMGVIGGGV FQAIKGFRNA PVGIRHRLRG STNAVRIRAP QIGGSFAVWG 120
  121 GLFSTIDCGL VRLRGKEDPW NSITSGALTG AVLAARSGPL AMVGSAMMGG ILLALIEGVG 180
  181 ILLTRYTAQQ FRNAPPFLED PSQLPPKDGT PAPGYPSYQQ YH

Type	Start	End	Confidence
Cytoplasmic	1	106	0.66
Transmembrane Helix	107	131	0.64
Non-Cytoplasmic	132	151	0.41
Transmembrane Helix	152	184	0.73
Cytoplasmic	185	222	0.80