YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109129906, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLSPSAPAV AVQASNTSAS PPSGCPMHEG KMKECPVSTE PSGPTCEKKT YSMPAHQERA  60
   61 YEYVECPIRG TAAENKENLD PSNLMPPPNQ TPAPDQPFVL STVREESSIP RADSEKKWVY 120
  121 PSEQMFWNAM LKKGWKWKDE DISQKDMYNI IRIHNQNNEQ AWKEILKWEA LHAAECPCGP 180
  181 SLIRFGGKAK EYSPRARIRS WMGYELPFDR HDWIINRCGT EVRYVIDYYD GGEVNKDYQF 240
  241 TILDVRPALD SLSAVWDRMK VAWWRWTS

Type	Start	End	Confidence
Signal Peptide	1	19	0.74
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	268	0.99