YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109129422, gi...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLATRVFSLV GKRAISTSVC VRAHESVVKS EDFMLPAYVD RRDYPLPDVA HVKHLSASQK  60
   61 ALKEKEKASW SSLSMDEKVE LYRIKFKESF AEMNRRSNEW KTVVGTAMFF IGITALVIMW 120
  121 EKLYVYGPLP QTFDKEWVAM QTKRMLDMKV NPIQGLASKW DYEKNEWKK

Type	Start	End	Confidence
Cytoplasmic	1	101	0.93
Transmembrane Helix	102	120	0.93
Non-Cytoplasmic	121	169	0.95