YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109129381
Protein type:	Transmembrane
Type Confidence:	0.56
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKQIIQSPK DAHGVQIKPS LLKWYCCFNA SDLYTIFVLS WAMYYLKVVS TGQTQILGKS  60
   61 FERNDNEKCF LRSNAAAFLK YWSSVLVRKF TEKHEWITTE NGIGTVGISN FAQEALGDVV 120
  121 YCSLPEVGTK LNKQDEFGAL ESVKAASELY SPLSGEVTEI NEALAENPGL VNKSCYEDGW 180
  181 LIKMTLSNPS ELDELMSEEA YEKYIKSIEE

Type	Start	End	Confidence
Cytoplasmic	1	20	0.54
Transmembrane Helix	21	45	0.51
Non-Cytoplasmic	46	210	0.98