YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109128848
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIAISLSPG TRSRDRKLEC KGDYFGNFIS QSSLLLFLLF DAANHNLPQL WKSDNLLILA  60
   61 LIAFICIETI MACSPCEGLY FFEFVSCSAF VVTGVLLIMF SLNLHMRIPQ INWNLTDLVN 120
  121 TGLSTFLFFI ASIVLATLNH RAGAEIAAVI FGFLATAAYA VNTFLAVQKW RVSVRQQSTN 180
  181 DYIRARTESR DVDSRPEIQR LDT

Type	Start	End	Confidence
Cytoplasmic	1	54	0.66
Transmembrane Helix	55	74	0.86
Non-Cytoplasmic	75	79	0.49
Transmembrane Helix	80	104	0.85
Cytoplasmic	105	117	0.52
Transmembrane Helix	118	138	0.91
Non-Cytoplasmic	139	145	0.51
Transmembrane Helix	146	167	0.92
Cytoplasmic	168	203	0.65