YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109128828
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPKAAKGAK TEPAPPPAGA KPQEDKKDDK EPLDKPQKLV QPKHEVGTRK GCRRYRWELK  60
   61 DSNKEFWLLG HAEVKILSLG CLIAAMILLS SLSVHPILTL IITMEISIFS FFIILYSFAV 120
  121 HRYIPFILWP ISDLFNDLFA CAFLVGAVVF AVRSRRSMHL HYLLAVILVG VAGVFALIDM 180
  181 CLQRNNFRGK RAKKHKLISP PGKEKEPQQG KGPEPAKPPE PAKGKK

Type	Start	End	Confidence
Cytoplasmic	1	73	0.92
Transmembrane Helix	74	94	0.84
Non-Cytoplasmic	95	96	0.58
Transmembrane Helix	97	120	0.84
Cytoplasmic	121	133	0.68
Transmembrane Helix	134	152	0.95
Non-Cytoplasmic	153	159	0.76
Transmembrane Helix	160	182	0.93
Cytoplasmic	183	226	0.92