YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109128810
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLRPLRGWA ALALRCFGPG SPGSPASGPG SRRVQRGAWP SDKEREKEKK SVICVEGNIA  60
   61 SGKTTCLEFF SNATDVEVLT EPVSKWRNVR GHNPLGLMYQ DASRWGLTLQ TYVQLTMLDR 120
  121 HTCPQVSSVR LMERSIHSAR YIFVENLYRS GKMPEVDYVV LSEWFDWILR NMDVSIDLIV 180
  181 YLRTNPETCY QRLKRRCREE EKVIPLEYLE AIHHLHEEWL IKGSLFPVAA PVLVIEADHH 240
  241 MERMLQLFEQ NRDRILTPEN RKLGP

Type	Start	End	Confidence
Signal Peptide	1	26	0.96
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	265	0.99