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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109128138
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDASSSPWNP TPAPVSSPPL LLPIPAIVFI AVGIYLLLLG LVLLTRHCLL AQGCCADGSS  60
   61 PCRKQGASGP PDCCWTCAEA CDFPLPSRAH FLDACCPQPT GAGFHSGDGE REITRPLQQR 120
  121 VRNGMLWNSG CFALHAVRNR TGHLAAPAAA HSATVPVRAS SPTARASTVS ASKSSSDENP 180
  181 GPLPSGEWPA PRAHGPSSLK SLSPGHWNHK WPAQHPGLGT GSGSVGPGSL QGGTLGRLDG 240
  241 SSSGGPEERG ATAGVPGQRF ISLDNQGPPS GFPKKKFPLK HRQGDPMARR KPEGSSFNMT 300
  301 HLSMAMAFSF PPVASAQLHP QLGNTQHQTE LGKELATTST MPYQYPALTP EQKKELSDIA 360
  361 HRIVAPGKGI LAADESTGSI AKRLQSIGTE NTEENRRFYR QLLLTADDRV NPCIGGVILF 420
  421 HETLYQKADD GRPFPQVIKS KGGVVGIKVD KGVVPLAGTN GETTTQGLDG LSERCAQYKK 480
  481 DGADFAKWRC VLKIGEHTPS ALAIMENANV LARYASICQQ NGIVPIVEPE ILPDGDHDLK 540
  541 RCQYVTEKVL AAVYKALSDH HIYLEGTLLK PNMVTPGHAC TQKFSHEEIA MATVTALRRT 600
  601 VPPAVTGITF LSGGQSEEEA SINLNAINKC PLLKPWALTF SYGRALQASA LKAWGGKKEN 660
  661 LKAAQEEYVK RALANSLACQ GKYTPSGHAG AAASESLFVS NHAY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle