YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109128038
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTMAAATLL RATPHFSGLA TGRTFLLQGL LRPLKTPALP LLCRGLAVEA KKTYVRDKPH  60
   61 VNVGTIGHVD HGKTTLTAAI TKILAEGGGA KFKKYEEIDN APEERARGIT INAAHVEYST 120
  121 AARHYAHTDC PGHADYVKNM ITGTAPLDGC ILVVAANDGP MPQTREHLLL ARQIGVEHVV 180
  181 VYVNKADAVQ DSEMVELVEL EIRELLTEFG YKGEETPVIV GSALCALEGR DPELGLKSVQ 240
  241 KLLDAVDTYI PVPTRDLEKP FLLPVEGVFS VPGRGTVVTG TLERGILKKG DECELLGHSK 300
  301 NIRTVVTGIE MFHKNLERAE AGDNLGALVR GLKREDLRRG LVMVKPGSIK PHQKVEAQVY 360
  361 ILSKEEGGRH KPFVSHFMPI MFSLTWDMAC RVILPPEKEL AMPGEDLKFN LILRQPMILE 420
  421 KGQRFTLRDG NRTIGTGLVT DTLAMTEEEK NIKWG

Type	Start	End	Confidence
Signal Peptide	1	20	0.82
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	455	0.99