YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109128018
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEAILVPCV LGLLLLPILA VLMALCVHCH RLPGSYDSAS SDSLYPRGIQ IKRPHTVAPW  60
   61 PPAYPPVTSY PPLNQPDLLP IPRSPQPLGG SHRTPSSRRD SDGANSVASY ENEEPACEDA 120
  121 DEDEDEDDYH NPGYLVVLPD STPAASTAAP SATALSTPGL RDSAFSMESI DDYVNVPESG 180
  181 ESAEASLDGS REYVNVSQEL HPGAAKTEPA ALSSQKAEEV EEEGAPDYEN LQELN

Type	Start	End	Confidence
Signal Peptide	1	29	0.95
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	235	0.99