YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109127967
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATRQRESSI TSCSSASSCD ADDEGVRGTC EDASLCKRFA VSIGYWHDPY IQHFVRLSKE  60
   61 RKAPEINRGY FARVHGVSQL IKAFLRKTEC HCQIINLGAG MDTTFWRLKD EDLLPSKYFE 120
  121 VDFPMIVTRK LHSIKCKPPL SSPILELHSE DTLQMDGHIL DSKRYAVIGA DLRDLSELEE 180
  181 KLKKCNMNTQ LPTLLIAECV LVYMTPEQSA NLLKWAASSF EAAMFINYEQ VNMGDRFGQI 240
  241 MIENLRRRQC DLAGVETCKS LESQKERLLS NGWETASAVD MMELYNRLPR AEVSRIESLE 300
  301 FLDEMELLEQ LMRHYCLCWA TKGGNELGLK EITY

Type	Start	End	Confidence
Signal Peptide	1	21	0.88
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	334	0.99