YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109127600
Protein type:	Transmembrane
Type Confidence:	0.72
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVPGPYQAA TGPSAAPSAP PSYEETVAVN SYYPTPPAPM PGPTTGLVTG PDGKGMNPPS  60
   61 YFTQAAPIPN NNPITVQTVY VQHPISFLDR PVQMCCPSCN KMIVSQLSYN AGALTWLSCG 120
  121 SLCLLGCVAG CCFIPFCVDA LQDVDHYCPN CRALLGTYKR L

Type	Start	End	Confidence
Cytoplasmic	1	112	0.62
Transmembrane Helix	113	137	0.65
Non-Cytoplasmic	138	161	0.89