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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109125159
Protein type: Transmembrane
Type Confidence: 0.75
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTGTGRGCP LSGERDCSSL RTPQSQEDWE MRMLNRKGLW GSGKCPRPHL TPTPTGQGQR  60
   61 RKTWVDTGRQ AQEEGDQHQP APPPPQPDKG PAGRDLPHQP SRKDSECPSG PAMRLFLSLP 120
  121 VLVVVLSMVL EGPAPAQGAP DVSSALEKLK EFGNTLEDKA WEVINRIKQS EFPAKTRDQR 180
  181 RQPWVGHLAA AAFLCCVILR FTGGLWASPC PVCGMMGDEL EIIDEYIKEN GFGLDGGQPG 240
  241 PGEGLPRLVS RGAASLSTVT LGPVAPPATP PPWGCPLGRL VPPAQGPGPQ PHLVITEQPK 300
  301 QRGMRFRYEC EGRSAGSILG ESSTEASKTL PAIELRDCGG LREVEVTACL VWKDWPHRVH 360
  361 PHSLVGKDCT DGVCRVRLRP HVSPRHSFNN LGIQCVRKKE IEAAIERKIQ LGIDPYNAGS 420
  421 LKNHQEVDMN VVRICFQASY RDQQGQMRRM DPVLSEPVYD KKSTNTSELR ICRINKESGP 480
  481 CTGGEELYLL CDKVQKEDIS VVFSRASWEG RADFSQADVH RQIAIVFKTP PYEDLEIVEP 540
  541 VTVNVFLQRL TDGVCSEPLP FTYLPRDHDS YGVDKKRKRG MPDVLGELNS SDPHGIESKR 600
  601 RKKKPAILDH FLPSHSSGPF LPPSALLPDP DFFSGTVSLP GLEPPGGPDL LDDGFAYDPT 660
  661 APTLFTMLDL LPPAPPHASA VVCSAGAVVG EPPGPEPLTL DSYQAPGPGD GGTASLVGSN 720
  721 MFPNQYREAA FGGGLLSPGP EAT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle