YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109124936
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAQKDQQKD VEAEGLSATT LLPKLIPSGA GREWLERRRA TIRPWGTFVD QQRFSRPRNL  60
   61 GELCQRLVRN VEYYQSNYVF VFLGLILYCV VTSPMLLVAL AVFFGACYIL YLRTLQSKLV 120
  121 LFGREVSPAH QYALAGGISF PFFWLAGAGS AVFWVLGATL VVIGSHAAFH QIEAVDGEEL 180
  181 QMEPV

Type	Start	End	Confidence
Cytoplasmic	1	78	0.81
Transmembrane Helix	79	112	0.80
Non-Cytoplasmic	113	139	0.66
Transmembrane Helix	140	164	0.82
Cytoplasmic	165	185	0.69