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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109124419
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAILPLLLCL LPLAPASSPP QSATPSLCPR RCRCQTQSLP LSVLCPGAGL LFVPPSLDRR  60
   61 AAELRLADNF IASVRRRDLA NMTGLLHLSL SRNTIRHVAA GAFADLRALR ALHLDGNRLT 120
  121 SLGEGQLRGL VNLRHLILSN NQLAALAASA LDDCAETLED LDLSYNNLEQ LPWEALGRLG 180
  181 NVNTLGLDHN LLASVPAGAF SRLHKLARLD MTSNRLTTIP PDPLFSRLPL LARPRGSPAS 240
  241 ALVLAFGGNP LHCNCELVWL RRLAREDDLE ACASPPALGG RYFWAVGEEE FVCEPPVVTH 300
  301 RSPPLAVPAG RPAALRCRAV GDPEPRVRWV SPQGRLLGNS SRARAFPNGT LELLVTEPGD 360
  361 GGIFTCIAAN AAGEATAAVE LTVGPPPPPQ LANSTSCDPP RDGDPDALTP PSAASASAKA 420
  421 ADTGPSTDRG VQVTEHGATA ALVQWPDQRP IPGIRMYQIQ YNSSADDILV YRMIPADSRS 480
  481 FLLTDLASGR AYDLCVLAVY EDSATGLTAT RPVGCARFST EPALRPCGAP HAPFLGGTMI 540
  541 IALGGVIVAS VLVFIFVLLM RYKVHGGQPP GKAKTPAPVS SVCSQTNGAL GPPPTPAPPA 600
  601 PEPAALRAHT VVQLDCEPWG PGHEPVGP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle