YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109123832
Protein type:	Transmembrane
Type Confidence:	0.77
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASRLELNL VRLLSRCEAM AAEKRDPDEW RLEKYVGALE DMLQALKVHA SKPASEVINE  60
   61 YSWKVDFLKG MLQAEKLTSS SEKALANQFL APGRVPTTAR ERVPATKTVH LQSRARYTSE 120
  121 MRSELLGTET GSEPEMDVRK RTGVAGSQPV SEKQSAAELD LVLQRHQNLQ EKLAEEMLGL 180
  181 ARSLKTNTLA AQSIIKKDNQ TLSHSLKMAD QNLEKLKTES ERLEQHTQKS VNWFLWAMLI 240
  241 IVCFIFISMI LFIRIMPKLK

Type	Start	End	Confidence
Non-Cytoplasmic	1	232	0.91
Transmembrane Helix	233	253	0.97
Cytoplasmic	254	260	0.77