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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109122771
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRPTGLLRG PVMGVTLLCP ALLGPGHTLG SAEEEVERGL AFREKGAVGA QLRPVHVSGS  60
   61 RPGVRVSALQ AAALCPPRAT ASGRGSASHP ASRAAPSSRK RKRGARPGAG GGACDLTFAP 120
  121 TPQSCRLRPG RVGGEAASPP PRSLFLLRGG PASDGRACHV GLTAGEGVAV DNVVPKRPAP 180
  181 GAAALRPPAR LNQPAPSGSR PGPHHVLQEE TRSHENPFHL EKEPRGKPQP AALGGEWSPG 240
  241 ADLELTPAAG GQGPALYSGP MLGQRLGARA SYSPYRAGRR GPQQRGRDPG IQLTELPRKD 300
  301 GVDAVFPGPS LEPSTGSSSA KATGTLKRPT SLSRHASAAG FPLSGAASWT LGRSHRSPLT 360
  361 AASPGEQPTE GAGPDGVEDI SHLLADVARF AEGLEKLKEC VLHDDLLEAR RPLAHECLGE 420
  421 ALRVMRQIIS KYPLLNTVET LTAAGTLIAK VKAFHYESNN DLEKQEFEKA LETIAVAFSS 480
  481 TVSEFLMGEV DSSTLLAVPP GDSSQSMESL YGPGSEGTPP GLDDCDAGCL PAEEVDVLLQ 540
  541 RCEGGVDAAL LYAKNMAKYM KDLISYLEKR TTLEMEFAKG LQKICHNCRQ SVMQEPHMPL 600
  601 LSIYSLALEQ DLEFGHGMVQ AVGTLQTQTF MQPLTLRRLE HEKRRKEIKE AWHRAQRKLQ 660
  661 EAESNLRKAK QGYTQRCEDH DKARFLVAKA EEEQAGTTLG AGSTVTKTLD KRRRLEEEAK 720
  721 NKAEEAMATY RTCVADAKTQ KQELEDTKVT ALRQIQEVIR QSDQTIKSAT ISYYQMMHMQ 780
  781 TAPLPVHFQM LCESSKLYDP GQQYASHVRQ LQRDQEPDVH YDFEPHVSAN AWSPVLRARK 840
  841 SSFNVSDVAG PEAAGSPPEE GIEGAPAKER RAGRGHQVHK SWPLSISDSD SGLDTGPGTG 900
  901 DFKKFERTSS SGTMSSTEEL VDPEGGAGAS AFEQADLNGM TPELPVAVPS GPFRHEGLSK 960
  961 AARTHRLRKL RTPAKCRECN SYVYFQGAEC EECCLACHKK CLETLAIQCG HKKLQGRLQL1020
 1021 FGQDFSQAAR SAPDGVPFIV KKCVCEIERR ALRTKGIYRV NGVKTRVEKL CQAFENGKEL1080
 1081 VELSQASPHD ISNVLKLYLR QLPEPLISFR LYHELVGLAK DSLKAEAEAK AASRGRQDGS1140
 1141 ESEAVMVAMA GRLRELLRDL PLENRASLQY LLRHLRRIVE VEQDNKMTPG NLGIVFGPTL1200
 1201 LRPRPTEATV SLSSLVDYPH QARVIETLIV HYGLVFEEEP EETPGDQDES SSQRAEVVIQ1260
 1261 VPYLEAGEGV VYPLQEAAED GCRESRVVSN DSDSDLEEAS ELLSSSEASA LRRLSLLEQQ1320
 1321 QSEASLEEAS GSHSGSEERL EATAREDGDE DDPARQLSGF NTNQSNNVLQ APLPTMRLRG1380
 1381 GRIAPGSCRE RRPEFV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle