YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109122478
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEQSDEAVK YYTLEEIQKH NHSKSTWLIL HHKVYDLTKF LEEHPGGEEV LREQAGGDAT  60
   61 ENFEDVGHST DAREMSKTYI IGELHPDDRP KLSKPPETLI TTVDSSSSWW TNWVIPAISA 120
  121 VAVALMYRLY MAED

Type	Start	End	Confidence
Cytoplasmic	1	108	0.55
Transmembrane Helix	109	131	0.85
Non-Cytoplasmic	132	134	0.58