YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109121600
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQLRAESCP FTDVVTTNLK LRNPSDRKVC FKVKTTAPRR YCVRPNSGII DPGSTVTVSV  60
   61 MLQPFDYDPN EKSKHKFMVQ TIFAPPNTSD MEAVWKEAKP DELMDSKLRC VFEMPNENDK 120
  121 LGITPPGNAP TVTSMSSINN TVATPASYHT KDDPRELSVL KQEKQKNDME PSKTVPLNAS 180
  181 KQDGPMPKPH SVSLNDTETR KLMEECKRLQ GEMMKLSEEN RHLRDEGLRL RKVAHSDKPG 240
  241 STSTASFRDN VTSPLPSLLV VIAAIFIGFF LGKFIL

Type	Start	End	Confidence
Non-Cytoplasmic	1	252	0.74
Transmembrane Helix	253	275	0.86
Cytoplasmic	276	276	0.72