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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109121512
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHRCLRLWG WGGSWPRGLQ QLRVPGGVGP GEQPCLRTLY RFVTTQTRAS RNSLLTDVIA  60
   61 AYQRFCSRPP KGFEKYFPNG KNGKEASEPK EVMGEKKESK PAATTRSSGG GGGGGGGKRG 120
  121 GKKDDSHWWS RFQKGDFPWD DKDFRMFFLW TSLFWGGVMF YFLLKRSGRE ITWKDFVNNY 180
  181 LSKGVVDRLE VVNKRFVRVT FTPGKTPVDG QYVWFNIGSV DTFERNLETL QQELGIEGEN 240
  241 RVPVVYIAES DGSFLLSMLP TVLIIAFLLY TIRRGPAGIG RTGRGMGGLF SVGETTAKVL 300
  301 KDEIDVKFKD VAGCEEAKLE IMEFVNFLKN PKQYQDLGAK IPKGAILTGP PGTGKTLLAK 360
  361 ATAGEANVPF ITVSGSEFLE MFVGVGPARV RDLFALARKN APCILFIDEI DAVGRKRGRG 420
  421 NFGGQSEQEN TLNQLLVEMD GFNTTTNVVI LAGTNRPDIL DPALLRPGRF DRQIFIGPPD 480
  481 IKGRASIFKV HLRPLKLDST LEKDKLARKL ASLTPGFSGA DVANVCNEAA LIAARHLSDS 540
  541 INQKHFEQAI ERVIGGIEKK TQVLQPEEKK TVAYHEAGHA VAGWYLEHAD PLLKVSIIPR 600
  601 GKGLGYAQYL PKEQYLYTKE QLLDRMCMTL GGRVSEEIFF GRITTGAQDD LRKVTQSAYA 660
  661 QIVQFGMNEK VGQISFDLPR QGDMVLEKPY SEATARLIDD EVRILINDAY KRTVALLTEK 720
  721 KADVEKVALL LLEKEVLDKN DMVELLGPRP FAEKSTYEEF VEGTGSLDED TSLPEGLKDW 780
  781 NKEREKEKEE PPGEKVAN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle