YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109121360
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLVAVSCLG PSLAAPGVEP FQKQTLLSHS GQKALSIELR GAFRADPREE RAGARERERR  60
   61 RRRRGTAESA GLTRSREGRR GVSGGQVPRG RGRARAGTQA AGFPGRLRNG QSRQARARLL 120
  121 LRASVQILRL LTKTAQGRNA PEAQIRGGGP AAGRGRGGAA GLQRGLEGAH KLKSSQKDKV 180
  181 RQFMACTQAG ERTAIYCLTQ NEWRLDEATD SFFQNPDSFH RESMRNTVDK KKLEQLYGRY 240
  241 KDPQDENKIG IDGIQQFCDD LSLDPASISV LVIAWKFRAA TQCEFSRKEF LDGMTELGCD 300
  301 SMEKLKALLP RLEQELKDTA KFKDFYQFTF TFAKNPGQKG LDLEMAVAYW KLVLSGRFKF 360
  361 LDLWNTFLLE HHKRSIPRDT WNLLLDFGNM IADDMSNYDE EGAWPVLIDD FVEYARPVVT 420
  421 GGKRSLF

Type	Start	End	Confidence
Signal Peptide	1	14	0.98
N-region	1	5
H-region	6	11
C-region	12	14
Cleavage Site	14	15
Non-Cytoplasmic	15	427	0.99