YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109121004
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDSVCVVVV VVVGAGGAPT RGGVLGGPRS RRAWAEAAAA AAAKAAAVRA GGPGTAAMEG  60
   61 QRWLPLEANP EVTNQFLKQL GLHPNWQFVD VYGMDPELLS MVPRPVCAVL LLFPITEKYE 120
  121 VFRTEEEEKI KSQGQAVTSS VYFMKQTISN ACGTIGLIHA IANNKDKMHF ESGSTLKKFL 180
  181 EESVSMSPEE RARYLENYDA IRVTHETSAH EGQTEAPNID EKVDLHFIAL VHVDGHLYEL 240
  241 DGRKPFPINH GETSDETLLE DAIEVCKKFM ERDPDELRFN AIALSAA

Type	Start	End	Confidence
Signal Peptide	1	22	0.87
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	287	0.99