YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109120490
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPLLLQLAV LGAALAAAAL VLISVVAFIT ATKMPALHRH EEEKFFLNAK GQKETLPSIW  60
   61 DLPTKQLSVV VPSYNEEKRL PVMMDEALSY LEKRQKRDPA FTYEVIVVDD GSKDKTSKVA 120
  121 FKYCQKYGSD KVRVITLVKN RGKGGAIRMG IFSSRGEKIL MADADGATKF PDVEKLEKGL 180
  181 NDLQPWPNQM AIACGSRAHL EKESIAQRSY FRTLLMYGFH FLVWFLCVKG IRDTQCGFKL 240
  241 FTREAASQTF SSLHVERWAF DVELLYIAQC FKIPIAEIAV NWTEIEGSKL VPFWSWLQMG 300
  301 KDLLFIRLRY MTGAWRLEQT RKMN

Type	Start	End	Confidence
Signal Peptide	1	27	0.94
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	324	0.93