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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109118860, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVRHPLCSR RLLAVCALVS LATAALLGHI LLHDFLLVPR ELSGSSSVLE ETRPARQQGA  60
   61 SRPGPQNAQA HPGCPRAVPT QCDVPPNSRF DCAPDKAITQ EQCEARGCCY IPAKQELRRA 120
  121 QMGQPWCFFP PSYPSYKLEN LSASEMGYTA TLTRTTPTFF PKDILTLRLD VMMETENRLH 180
  181 FTIKDPANKR YEVPLETPRV PSRALSPLYS VEFSEEPFGV IVRRQLDGRV LLNTTVAPLF 240
  241 FADQFLQLST SLPSQYITGL AEHLSPLMLS TSWTRITLWN RDLAPTPGAN LYGSHPFYLA 300
  301 LEDGGSAHGV FLLNSNAMDV VLQPSPALSW RSTGGILDVY IFLGPEPKSV VRQYLDVVGY 360
  361 PFMPPYWGLG FHLCRWGYSS TAITRQVVEN MTRAHFPLDV QWNDLDYMDS RRDFTFNKDG 420
  421 FRDFPAMVQE LHQGGRRYVM IVDPAISISG PAGSYRPYDE GLRRRVFITN ETGQPLIGKV 480
  481 WPGSTAFPDF TNPAALAWWE DMVAEFHDQV PFDGMWIDMN EPSNFIRGSE DGCPHNELEE 540
  541 PPYVPGVVGG TLQAATICAS SHQFLSTHYN LHNLYGLTEA IASYRALVKA RGTRPFVISR 600
  601 STFAGHGRYA GHWTGDVWSS WEQLAASVPE ILQFNLLGVP LVGADVCGFL GNTSEELCVR 660
  661 WTQLGAFYPF MRNHNGLLNL PQEPYSFSEP AQQAMRKALT LRYALLPHLY TLFHQAHVAG 720
  721 ETVARPLFLE FPEDSSTWTV DHQLLWGEAL LITPVLQAGK AEVTGYFPSG TWYNLETVPI 780
  781 EALGSLPPPP AAPREPAIHS EGQWVTLPAP LDTINVHLRA GHIIPLQGPG LTTTESRQQP 840
  841 MALAVALTKG GEAQGELFWD DGESLEVLER GAYTQVIFLA RSNTVMNELV HVTSEGAGLQ 900
  901 LQKVTVLGVA TAPQQVLSNG APVSNFTYSP DTKVLDIPVS LLVGEQFLIS WS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle