YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109118170
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPIVKSNLLA CGVSFCLSPP LPPPRLTQVR WSRYSPEFKD PLIDKEYYRK PVEELTEEEK  60
   61 YDRELKKTQL IKAAPAGKTS SVFEDPVISK FTNMMMKGGN KVLARSLVTQ TLEAVKRKQF 120
  121 EKYHSASAEE QATIERNPYT IFHQALKNCE PVIGLVPILK GGRFYQVPVP LPDQRRRFLA 180
  181 MKWMITECRE NKHRRTLMPE KLSHELLEAF HNRGPVIKRK HEMHKMAEAN RALAHYRWW

Type	Start	End	Confidence
Signal Peptide	1	27	0.98
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	239	0.99