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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109116777
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.41
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVRRGHVAP QNTYLDTIIR KFEGQSRKFL IANAQMENCA IIYCNDGFCE LFGYSRVEVM  60
   61 QQPCTCDFLT GPNTPSSAVS RLAQALLGAE ECKVDILYYR KDASSFRCLV DVVPVKNEDG 120
  121 AVIMFILNFE DLAQLLAKRS SRSLSQRLLS QSFLGSEGSH GRPGGPGPGT GRGKYRTISQ 180
  181 IPQFTLNFVE FNLEKHRSSS TTEIEIIAPH KVVERTQNVT EKVTQVLSLG ADVLPEYKLQ 240
  241 APRIHRWTIL HYSPFKAVWD WLILLLVIYT AVFTPYSAAF LLSDQDESRR GACGYTCSPL 300
  301 TVVDLIVDIM FVVDIVINFR TTYVNTNDEV VSHPRRIAVH YFKGWFLIDM VAAIPFDLLI 360
  361 FRTGSDETTT LIGLLKTARL LRLVRVARKL DRYSEYGAAV LFLLMCTFAL IAHWLACIWY 420
  421 AIGNVERPYL EHKIGWLDSL GVQLGKRYNG SDPASGPSVQ DKYVTALYFT FSSLTSVGFG 480
  481 NVSPNTNSEK VFSICVMLIG SLMYASIFGN VSAIIQRLYS GTARYHTQML RVKEFIRFHQ 540
  541 IPNPLRQRLE EYFQHAWSYT NGIDMNAVLK GFPECLQADI CLHLHRALLQ HCPAFSGASK 600
  601 GCLRALAVKF KTTHAPPGDT LVHLGDVLST LYFISRGSIE ILRDDVVVAI LGKNDIFGEP 660
  661 VSLHARPGKS SADVRALTYC DLHKIQRADL LEVLDMYPAF ADSFWSKLEV TFNLRDAAGG 720
  721 LHSSPRQAPG SQDHQGFFLN DNQSGSPHEL GPQFPSKGYH LLGPGNQNSM GAGACAPGHP 780
  781 DAAPPLSISD ASGLWPELLQ KMPPRHSPPT PQGDPDCWPL KLGSRLEQLQ AQMNRLESRV 840
  841 SSDLSRILQL LQQPMPQGQA TYILEAPASN DLALFPIASE MTSPGPRLPQ GFLPPAQTPS 900
  901 YGDLDDCSAK HRSSSPRMPH LAVATDKTLA PSSEEEQPEG LWAPLASPLY PLKVQGLICG 960
  961 PCFSSLPEHL GSVPKQLDFQ RHGSDPGFAG SWGH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle