YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109116287, gi...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLVGLTGGI ASGKSSVIQV FQQLGCAVID VDVMARHVVQ PGYPAHRRIV EAFGTEVLLE  60
   61 NGDINRKVLG DLIFNQPDRR QLLNAITHPE IRKEMMKETF KYFLRGYRYV ILDIPLLFET 120
  121 KKLLKYMKHT VVVYCDRDTQ LARLMRRNSL NRKDAEARIN AQLPLTDKAR MARHVLDNSG 180
  181 EWSVTKRQVI LLHAELERSL EYLPLRLGVL TGLAAIASLL YLLTRYLLPY A

Type	Start	End	Confidence
Cytoplasmic	1	201	0.70
Transmembrane Helix	202	224	0.84
Non-Cytoplasmic	225	231	0.59