YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109114390
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGLWYPGWR GVAFCGWRWI HPGSPARAAE RVEPFLRPAW SGTGGTERGL RWLGTWKHCS  60
   61 LPARHPALQP PRRPKSSDPF TRAHVEEWRR RNKTTLTYVA AVAVAMLGAS YAAVPLYRLY 120
  121 CQTTGLGGSA VAGHASDQIE NMVPVKDRIL KISFNADVHA SLQWNFRPQQ TEIYVVPGET 180
  181 ALAFYRAKNP TDKPIIGIST YNVVPFEAGQ YFNKIQCFCF EEQRLNPQEE VDMPVFFYID 240
  241 PEFAEDPRMI NVDLITLSYT FFEAKEGHTL PVPGYN

Type	Start	End	Confidence
Cytoplasmic	1	94	0.86
Transmembrane Helix	95	114	0.85
Non-Cytoplasmic	115	276	0.95