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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109113740
Protein type: Transmembrane
Type Confidence: 0.64
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSEVVRGKR AALFFAAVAI VLGLPLWWKT TETYRASLPY SQISGLNALQ LRLMVPVTVV  60
   61 FARESVPLDD QEKLPFTVVH EREIPLKYKM KIKCRFQKAY RRALDHEEEA LSSGSVQEAE 120
  121 AMLDEPQEQA EGSLTVYVIS EHSSLLPQDM MSYIGPKRTA VVRGIMHREA FNIIGRRIVQ 180
  181 VAQAMSLTED VLAAALADHL PEDKWSAEKR RPLKSSLGYE ITFSLLNPDP KSHDVHWDIE 240
  241 GAVRRYVQPF LNALSAAGNF SVDSQILYYA MLGVNPRFDS ASSSYYLDMH NLPHVINPVE 300
  301 SRLGSSAASL YPVLNFLLYV PELAHSPLYI QDKDGAPVAT NAFHSPRWGG IMVYNVDSKT 360
  361 YNASVLPVRV KVDMVRVMEV FLAQLRLLFG IAQPQVPPKC LLSGPKSEGL MTWELDRLLW 420
  421 ARSVENLATA TTTLTSLAQL LGKISNIVIK DDVASEVYRA VAAVQKSAEE LASGHLASAF 480
  481 VASQEAVTSS ERAFFDPSLL HLLYFPDDQK FAIYIPLFLP MAVPILLSLV KIFLETHKSW 540
  541 KKPEKTD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle