YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109113449
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAMWFLCVA AAVVAWGFLW VWDSSERVKS REQGERLGAE SRTLLAIAHP DDEAMFFAPT  60
   61 VLGLARLRHW VYLLCFSAGR YYYQPDQHGE TRKKEMLQKC VVWNCALISI VLLPCRDFPD 120
  121 DPGVQWDTEH VASVLLQHIE VNGINLVVTF DAGGVSGHSN HIALYAAVRA LHSEGKLPKG 180
  181 CSVLTLQSVN VLRKYISLLD LPLSRLHTQD VLFVLNSKEV AQAKRAMSCH RSQLLWFRRL 240
  241 YILFSRYMRI NSLSFL

Type	Start	End	Confidence
Signal Peptide	1	17	0.65
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	256	0.89