YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109113368
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPLGPAGAL PTSAEPLSRS IFRKFLLMLC SLLTSLYVFY CLAERCQTLS GPVVGLSGGG  60
   61 EEAGTPGRGV LAGGPRELAV WPAAAQRKRL LQLQQWRRRR PPSPRDNGEE AAWEEESPGL 120
  121 AGGPGGSGAG SSVAEAPQGT LALLLDEGSK QLPQAIIIGV KKGGTRALLE FLRVHPDVRA 180
  181 VGAEPHFFDR SYEKGLAWYR DLMPRTLDGQ ITMEKTPSYF VTREAPARIS AMSKDTKLIV 240
  241 VVRDPVTRAI SDYTQTLSKR PDIPTFESLT FKNRTTGLID TSWSAIQIGI YAKHLEHWLR 300
  301 HFPIRQMLFV SGERLISDPA GELGRVQDFL GLKRIITDKH FYFNKTKGFP CLKKAEGSSR 360
  361 PHCLGKTKGR THPEIDREVV RRLREFYRPF NLKFYQMTGH DFGWDG

Type	Start	End	Confidence
Signal Peptide	1	43	0.85
N-region	1	34
H-region	35	40
C-region	41	43
Cleavage Site	43	44
Non-Cytoplasmic	44	406	0.99