YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109113077
Protein type:	Globular with Signal Peptide
Type Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTQCLLGLR TFVAFAAKLW SFFIYLLRRQ IRTVIQYQTV RYDILPLSPV SRNRLAQVKR  60
   61 KILVLDLDET LIHSHHDGVL RPTVRPGTPP DFILKVVIDK HPVRFFVHKR PHVDFFLEVV 120
  121 SQWYELVVFT ASMEIYGSAV ADKLDNSRSI LKRRYYRQHC TLELGSYIKD LSVVHSDLSS 180
  181 IVILDNSPGA YRSHPDNAIP IKSWFSDPSD TALLNLLPML DALRFTADVR SVLRRRAGET 240
  241 SGFVRGTDVD RLSGRWPQAA GAPTSAVRGG VGPHSPPSPS RPRLPGALPS RPYFAHPPRD 300
  301 APPSLRSHDF TQTVRCSSAL A

Type	Start	End	Confidence
Signal Peptide	1	16	0.51
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	321	0.96