YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109112933
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPLLRCVPR VLGSAVPSLR AAAPASPFRQ LLQPAPRLCA RPFGLLSVRA GSERRPGLLR  60
   61 PRGPCACGCG CSLLHTEGDK AFVDFLKDEI EEERKIQKHK TLPKMSGGWE LELNGTEAKL 120
  121 VRKVAGEKII VTFNINNSIP PTFDGEEEPT QKQKVEEQEP ELTSTPNFVV EVIKNDGKKA 180
  181 LVLDCHYPED EVGQEDEAES DIFSIREVSF QSSGESEWKD TNYTLNTDSL DWALYDHLMD 240
  241 FLADRGVDNT FADELVELST ALEHQEYISF LEDLKRFVKS Q

Type	Start	End	Confidence
Signal Peptide	1	24	0.88
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	281	0.99