YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109112811
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAAHLLPAA DVLRHFSVTA EGGLSAAQVT GARERYGPNE LPTEEGKSLW ELVLEQFEDL  60
   61 LVRILLLAAL VSFVLAWFEE GEETTTAFVE PLVIMLILVA NAIVGVWQER NAESAIEALK 120
  121 EYEPEMGKVI RSDRKGVQRI RARDIVPGDI VEVAVGDKVP ADLRLIEIKS TTLRVDQSIL 180
  181 TGESVSVTKH TEAISDPRAV NQDKKNMLFS GTNIASGKAV GVAVATGLHT ELGKIRSQMA 240
  241 AVEPERTPLQ RKLDEFGRQL SHAISVICVA VWVINIGHFA DPAHGGSWLR GAVYYFKIAV 300
  301 ALAVAAIPEG LPAVITTCLA LGTRRMARKN AIVRSLPSVE TLGCTSVICS DKTGTLTTNQ 360
  361 MSVCRMFVVA EADAGSCLLH EFTISGTTYT PEGEVRQGNL PVRCGQFDGL VELATICALC 420
  421 NDSALDYNEA KGVYEKVGEA TETALTCLVE KMNVFDTDLQ ALSRVERAGA CNAVIKQLMQ 480
  481 KEFTLEFSRD RKSMSVYCTP TRPHPAGQGS KMFVKGAPES VIERCSSVRV GSHTAPLTPA 540
  541 SREQILAKIR DWGSGSDTLR CLALATRDVP PRKEDMELDD CSKFVQYETD LTFVGCVGML 600
  601 DPPRPEVAAC ITRCHQAGIR VVMITGDNKG TAVAICRRLG IFGDTEDVAG KAYTGREFDD 660
  661 LSPEQQRHAC RTARCFARVE PAHKSRIVEN LQSFNEITAM TGDGVNDAPA LKKAEIGIAM 720
  721 GSGTAVAKSA AEMVLSDDNF ASIVAAVEEG RAIYNNMKQF IRYLISSNVG EVVCIFLTAI 780
  781 LGLPEALIPV QLLWVNLVTD GLPATALGFN PPDLDIMEKL PRNPREALIS GWLFFRYLAI 840
  841 GVYVGLATVA AATWWFLYDA EGPHVNFYQL VSKGWPGSC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle