YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109112344
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDQTYCDRL VQDTPFLTGH GRLSEQQVDR IILQLNRYYP QILTNKEAEK FRNPKASLRV  60
   61 RLCDLLSHLQ RSGERDCQEF YRALYIHAQP LHSCLPSRHA LQNSDCTQLD SGSQSGELSD 120
  121 RGPMSFLAGL GLAVGLALLL YCYPPDPKGL PGTRRVLGFS PVIIDRHVSR YLLAFLADDL 180
  181 GGL

Type	Start	End	Confidence
Cytoplasmic	1	122	0.52
Transmembrane Helix	123	143	0.83
Non-Cytoplasmic	144	183	0.62