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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109111542
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.95
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVHVARLLLL LLTFFLRTDA ETPPRFTRTP VDQTGVSGGV ASFICQATGD PRPKIVWNKK  60
   61 GKKVSNQRFE VIEFDDGSGS VLRIQPLRTP RDEAIYECVA SNNVGEISVS TRLTVLREDQ 120
  121 IPRGFPTIDM GPQLKVVERT RTATMLCAAS GNPDPEITWF KDFLPVDTSN NNGRIKQLRS 180
  181 GALQIEQSEE SDQGKYECVA TNSAGTRYSA PANLYVRVRR VPPRFSIPPT NHEIMPGGSV 240
  241 NITCVAVGSP MPYVKWMLGA EDLTPEDDMP IGRNVLELND VRQSANYTCV AMSTLGVIEA 300
  301 IAQITVKALP KPPGTPIVTE STATSITLTW DSGNPEPVSY YIIQHKPKNS EEPYKEIDGV 360
  361 ATTRYSVAGL SPYSDYEFRV VAVNNIGRGP PSEPVLTQTS EQAPSSAPRD VQARMLSSTT 420
  421 ILVQWKEPEE PNGQIQGYRV YYTMDPTQHV NNWMKHNVAD SQITTIGNLV PQKTYSVKVL 480
  481 AFTSIGDGPL SGDIQVITQT GVPGQPLNFK AEPESETSIL LSWTPPRSDT IANYELVYKD 540
  541 GEHGEEQRIT IEPGTSYRLQ GLKPNSLYYF RLAARSPQGL GASTAEISAR TMQSKPSAPP 600
  601 QDISCTSPSS TSILVSWQPP PVEKQNGIIT EYSIKYTAVD GEDEKPHEIL GIPSDTTKYL 660
  661 LEQLEKWTEY RITVTAHTDV GPGPESLSVL IRTDEDVPSG PPRKVEVEAV NSTSVKVSWR 720
  721 SPVPNKQHGQ IRGYQVHYVR MENGEPKGQP MLKDVMLADA QDMIISGLQP ETSYSLTVTA 780
  781 YTTKGDGARS KPKLVSTTGA VPGKPRLVIN HTQMNTALIQ WHPPVDTFGP LQGYRLKFGR 840
  841 KDMEPLTTLE FSEKEDHFTA TDIHKGASYV FRLSARNKVG FGEEMVKEIS IPEEVPTGFP 900
  901 QNLHSESATS TSVQLSWQPP VLAERNGIIT KYTLLYRDIN IPLLPMEQLI VPADITMTLT 960
  961 GLKPDTTYDV KVRAHTSKGP GPYSPSVQFR TLPVDQVFAK NFHVKAVMKT SVLLSWEIPE1020
 1021 NYNSAMPFKI LYDDGKMVEE VDGRATQKLI VNLKPEKSYS FVLTNRGNSA GGLQHRVTAK1080
 1081 TAPDVLRTKP AFIGKTNLDG MITVQLPEVP ANENIKGYYI IIVPLKKSRG KFIKPWESPD1140
 1141 EMELDELLKE ISRKRRSIRY GREVELKPYI AAHFDVLPTE FTLGDDKHYG GFTNKQLQSG1200
 1201 QEYVFFVLAV MEHAESKMYA TSPYSDPVVS MDLDPQPITD EEEGLIWVVG PVLAVVFIIC1260
 1261 IVIAILLYKR KRAESDSRKS SIPNSKEIPS HHPTDPVELR RLNFQTPGMA SHPPIPILEL1320
 1321 ADHIERLKAN DNLKFSQEYE SIDPGQQFTW EHSNLEVNKP KNRYANVIAY DHSRVLLSAI1380
 1381 EGIPGSDYVN ANYIDGYRKQ NAYIATQGSL PETFGDFWRM IWEQRSATVV MMTKLEERSR1440
 1441 VKCDQYWPSR GTETHGLVQV TLLDTVELAT YCVRTFALYK NGSSEKREVR QFQFTAWPDH1500
 1501 GVPEHPTPFL AFLRRVKTCN PPDAGPMVVH CSAGVGRTGC FIVIDAMLER IKHEKTVDIY1560
 1561 GHVTLMRAQR NYMVQTEDQY IFIHDALLEA VTCGNTEVPA RNLYAYIQKL TQIETGENVT1620
 1621 GMELEFKRLA SSKAHTSRFI SANLPCNKFK NRLVNIMPYE STRVCLQPIR GVEGSDYINA1680
 1681 SFIDGYRQQK AYIATQGPLA ETTEDFWRML WEHNSTIVVM LTKLREMGRE KCHQYWPAER1740
 1741 SARYQYFVVD PMAEYNMPQY ILREFKVTDA RDGQSRTVRQ FQFTDWPEQG VPKSGEGFID1800
 1801 FIGQVHKTKE QFGQDGPISV HCSAGVGRTG VFITLSIVLE RMRYEGVVDI FQTVKMLRTQ1860
 1861 RPAMVQTEDQ YQFCYRAALE YLGSFDHYAT 

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