YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109111501
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLLLLQLLV LLPLGKATRH QDGRQNQNSL SPALLPRNQR ELPTSNHEEA EEKPDLFVAV  60
   61 PHLVGTSPAG EGQRQREKML SRFGRFWKKP EREMRPSRDS DSEHFPPGNQ SLIQPIDGMK 120
  121 MEKSPLREEA KKFWHHFMFR KSPASQGVIL PIKSHEVHWE TCRTVPFSQT ITHEGCEKVV 180
  181 VQNNLCFGKC GSVHFPGAEQ HSHTFCSHCL PAKFTTMHLP LNCTEVSSVI KVVMLVEECQ 240
  241 CKVKTEHEDG HFLHAGSQDS FIPGVST

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	267	0.99