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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109110418
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLLGILCFL IFLGKTWGQE QTYVISAPKI FRVGASENIV IQVYGYTEAF DATISIKSYP  60
   61 DKKFSYSSGH VHLSSENKFQ NSAVLTIQPK QLPGGQNQVS YVYLEVVSKH FSKSKKIPIT 120
  121 YDNGFLFIHT DKPVYTPDQS VKVRVYSLND DLKPAKRETV LTFIDPEGSE IDMVEEIDHI 180
  181 GIISFPDFKI PSNPRYGMWM IQAKYKEDFS TTGTAFFEVK EYVLPHFSVS VEPESNFIGY 240
  241 KNFKNFEITI KARYFYNKVV TEADVYITFG IREDLKDDQK EMMQTAMQNT MLINGIAQVT 300
  301 FDSETAVKEL SYYSLEDLNN KYLYIAVTVI ESTGGFSEEA EIPGIKYVLS PYKLNLVATP 360
  361 LFLKPGIPYS IKVQVKDALD QLVGGVPVTL NAQTIDVNQE TSDLEPRKSV TRVDDGVASF 420
  421 VVNLPSGVTV LEFNVKTDAP DLPDENQARE GYRAIAYSSL SQSYLYIDWT DNHKALLVGE 480
  481 YLNIIVTPKS PYIDKITHYN YLILSKGKII HFGTREKLSD ASYQSINIPV TQNMVPSSRL 540
  541 LVYYIVTGEQ TAELVSDSVW LNIEEKCGNQ LQVHLSPDAD TYSPGQTVSL NMVTGMDSWV 600
  601 ALTAVDSAVY GVQRRAKKPL ERVFQFLEKS DLGCGAGGGL NNANVFHLAG LTFLTNANAD 660
  661 DSQENDEPCK EIIRPRRMLQ EKIEEIAAKY KHLVVKKCCY DGVRINHDET CEQRAARISV 720
  721 GPRCVKAFTE CCVVASQLRA NNSHKDLQLG RLHMKTLLPV SKPEIRSYFP ESWLWEVHLV 780
  781 PRRKQLQFAL PDSVTTWEIQ GVGISNSGIC VADTIKAKVF KDVFLEMNIP YSVVRGEQVQ 840
  841 LKGTVYNYRT SGMQFCVKMS AVEGICTSES PVIDHQGTKS SKCVRQKVEG SSNHLVTFTV 900
  901 LPLEIGLQNI NFSLETSFGK EILVKSLRVV PEGVKRESYS GITLDPRGIY XXXXXXXRKE 960
  961 FPYRIPLDLV PKTEIKRILS VKGLLVGEIL SAVLSREGIN ILTHLPKGSA EAELMSVVPV1020
 1021 FYVFHYLETG NHWNIFHSDP LIEKRNLEKK LKEGMVSIMS YRNADYSYSV WKGGSASTWL1080
 1081 TAFALRVLGQ VHKYVEQNQN SICNSLLWLV ENYQLDNGSF KENSQYQPIK LQVRKPNAKI1140
 1141 GNSFIYSLSF ILIRLKKNLC LCLVKINTAL IKADTFLLEN TLPAQSTFTL AISAYALSLG1200
 1201 DKTHPQFCSI VSALKREALV KGNPPIYRFW KDSLQHKDSS VPNTGTARMV ETTAYALLTS1260
 1261 LNLKDINYVN PIIKWLSEEQ RYGGGFYSTQ DTINAIEGLT EYSLLVKQLR LNMDIDVAYK1320
 1321 HKGPLHNYKM TDKNFLGRPV EVLLNDDLVV STGFGSGLAT VHVTTVVHKT STSEEVCSFY1380
 1381 LKIDTQDIEA SHYRGYGNSD YKRIVACASY KPSKEESSSG SSHAVMDISL PTGINANEED1440
 1441 LKALVEGVDQ LFTDYQIKDG HVILQLNSIP SSDFLCVRFR IFELFEVGFL SPATFTVYEY1500
 1501 HRPDKQCTMF YSTSNIKIQK VCEGATCKCI EADCGQMQKE LDLTISAETR KQTACNPEIA1560
 1561 YAYKVIITSI TTENVFVKYK ATLLDIYKTG EAVAEKDSEI TFIKKVTCTN AELVKGRQYL1620
 1621 IMGKEALQIK YNFTFRYIYP LDSLTWIEYW PRDTTCSSCQ AFLANLDEFA EDIFLNGC

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