YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109109795
Protein type:	Globular with Signal Peptide
Type Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATVPAALPR MLGAGARALS RWLGFLGKAT SGPARSSRRT LGSAATPVIR ESEDGTDFND  60
   61 KILNEPLKHS DFFNVKELFS VRSLFDARVH LGHKAGCRHR FMEPYIFGNR LDQDIIDLEQ 120
  121 TAAHLQLALN FTAHVAYRKG IILFISRNRQ FSYLIENTAR HCGEYAHTRY FKGGLLTNAP 180
  181 LLFGPAVRLP DLIIFLHTLN TIFEPHVAVR DAAKMNIPTV GIVDTNCNPC LITYPIPGND 240
  241 DSPPAVHLYC RLFQTTITRA KEKRRQVEAL YRLQAQKEPG AQGPAHPPGA DVSRSL

Type	Start	End	Confidence
Signal Peptide	1	18	0.57
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	296	0.98